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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917774.1_cds_XP_016467315.1_60074
CDS Infomation

[gene=LOC107789949] [db_xref=GeneID:107789949] [protein=uncharacterized RNA methyltransferase pc1998] [protein_id=XP_016467315.1] [location=complement(join(87768..87855,88814..88893,89076..89226,89354..89484,96150..96267,96960..97078,97680..97793,97961..98044,98128..98207,98282..98336,98442..98509,98705..98749,98849..98960,99072..99186,99743..99936))] [gbkey=CDS]
Sequence

ATGGCGCTGAGCTTCTTCTTCTCTCCGGCAGTTCCAATCCATCGCATTATTAGCTGTCAA
GCTACGACCAATCAGCTGTGCGCAGAACGCATCGCTGCCCCATCATCATCAGCTCTCTCT
ATAAACCCTAATAATCCTATCCCTTCTCCTCCATCTTCCTTATCTTGCGCCCTCAATTGC
ACTCATTTCCAGTCGTGTTCTGGTTGCACTCAAGAGTTTGATCTTCACCGTCCAGTAGTT
ATTGATGAAGCTATAGGTTACTTCAAGAAGCTCGGCGTGAAAGATTTTTCATTTGATAGT
TGTAGATTATGGGGATGGAGATGTCGTGCAAAGCTTGCTATTCGCGGTTCATCAAGCAAG
CCCCTGATTGGGCTTTATGAGGAGGGCACTCATAATGTAGTTGATATCCCGGACTGTAAA
GCTCATCATCCGAACATCAATGCTGCTGTGGAGCTCCTGAAGCGAGGGATAATTGAGTTG
AATGTTGAACCATATGATGAAGATCAAGGCACTGGTGACCTGAGGTATGTTCAGATGGCC
GTCACAACGCATGATACATCCCTTCCTATCCCGGAGAGATATAAGAATGGTAAAGTGCAG
GTCTCTTTGGTTTGGAATTCAAGAAGCGAGAATTCAGCTAGCGCTGGAAAATTAAATGCT
TTAGCCAATTTCCTCTGGGCAAATGGTGGGCCAAAGAGAAAAGTTCATTTAATTCATTCA
GTTTGGGCTAATTTCCAGACATCATCAAATAATATTATCTTTGGAAACAGATGGAGACAT
TTGTTAGGGGAAAGAGATTTCTGGGAGCACATTGGAGGGATTGATGTCTCTTTAGCTCCA
TCAAGCTTTGGGCAAGCAAATACACGGGCTTTTGACTCTTTGCTGCGGAAGTTACAGAAA
TATGTCCCACTCGGTGCATCAGTTGTTGATCTCTATGCAGGAGCTGGTGTAATTGGGTTA
TCTTTGGCTTTTTCAAGGAAATGTCGGTCAGTTAAATGTGTTGAGGTTAATAAAGAGTCC
AAGCAATCTTTTGAGAAGACAGTTGAGCGCTTGCCTACCAATGTCGAAAGCAATATCAGC
TGGCACCATGCAGACGCTTCTATAGAACCAACTTCATGGCTCTTGGGATCGGATGTTGTT
GTGGTTGACCCTCCGAGGAAAGGGCTGGACCCGTCCTTGGTGAAGGAACTACGGCACATC
TCAGCATTGGAACTGAGAACCAATTCATCTAAAAGACCTGAAAAGGTAAGAGACGAGAAG
AGACCGTGGGTCCTGCGTGCCAGAGAAGCTGCAATTCAAATTGAAAACACAACTGTACAT
GAGGAAGATCAATCATTGCCTCAGATTCTTATCTATATTAGCTGTGGTTGGGAAAGTTTT
AAAGAGGATTGCTTGTCACTGCTAGCTAGTAAGGAATGGCATTTGCATAAAGCCCATGGC
TTTAATTTCTTTCCTGGAACACAAAGTATTGAGATTCTAGCTGTCTTTAAACGCGGCAGA
GGAGCTAGCACCAAGAAGAAGAAATCGGGGAAAAAACAAAAGAGACCCCACTGA

Peptide Sequence

PEP ID

XP_016467315.1
PEP Infomation

PREDICTED: uncharacterized RNA methyltransferase pc1998 [Nicotiana tabacum]
Sequence

MALSFFFSPAVPIHRIISCQATTNQLCAERIAAPSSSALSINPNNPIPSPPSSLSCALNC
THFQSCSGCTQEFDLHRPVVIDEAIGYFKKLGVKDFSFDSCRLWGWRCRAKLAIRGSSSK
PLIGLYEEGTHNVVDIPDCKAHHPNINAAVELLKRGIIELNVEPYDEDQGTGDLRYVQMA
VTTHDTSLPIPERYKNGKVQVSLVWNSRSENSASAGKLNALANFLWANGGPKRKVHLIHS
VWANFQTSSNNIIFGNRWRHLLGERDFWEHIGGIDVSLAPSSFGQANTRAFDSLLRKLQK
YVPLGASVVDLYAGAGVIGLSLAFSRKCRSVKCVEVNKESKQSFEKTVERLPTNVESNIS
WHHADASIEPTSWLLGSDVVVVDPPRKGLDPSLVKELRHISALELRTNSSKRPEKVRDEK
RPWVLRAREAAIQIENTTVHEEDQSLPQILIYISCGWESFKEDCLSLLASKEWHLHKAHG
FNFFPGTQSIEILAVFKRGRGASTKKKKSGKKQKRPH

Transcript Sequence

Gene sequence data has not been registered.